The following tables compare notable reference management software. The comparison includes older applications that may no longer be supported, as well as actively-maintained software.

General

In the "notes" section, there is a difference between:

  • web-based, referring to applications that may be installed on a web server (usually requiring MySQL or another database and PHP, Perl, Python, or some other language for web applications), and;
  • a centrally hosted website.
SoftwareDeveloperFirst public releaseLatest stable release dateLatest stable versionCost (USD)Free softwareLicenseNotes
BibBaseChristian Fritz20052024-06-06?Free for students / Paid plan for othersNoProprietaryCentrally hosted website, intended for publication pages
BibDeskBibDesk developers2002-042026-01-191.9.10FreeYesBSDBibTeX front-end + repository; Cocoa-based; integration with Spotlight
BibSonomyUniversity of Kassel2006-012024-01-084.1.0FreeYesAGPL, GPL, LGPLCentrally hosted website
BookendsSonny Software1988 (Mac) / 1983 (Apple II+)2023-05-0614.2US$59.99NoProprietaryDesktop & iOS synced via iCloud, integrated web search, PDF download, auto-completion, Word plugin, BibTex support, PDF annotations stored as notes
CitaviLumivero2006-02-132023-08-156.17.0.0US$89-1947NoProprietaryData can be saved locally on the computer, or, for team access, in the Citavi Cloud or an intranet Microsoft SQL Server; search databases from interface
EndNoteClarivate19882026-01-302026US$275NoProprietaryThe web version (formerly, EndNote Web) is free of charge
JabRefJabRef developers2003-11-292024-07-115.15FreeYesMIT licenseJava BibTeX and BibLaTeX manager
KBibTeXKBibTeX developers2005-082020-04-260.9.2FreeYesGNU GPLBibTeX front-end, using the KDE Software Compilation
MendeleyElsevier2008-082025-06-052.135.0Free / Online storage free up to 2 GB / Additional storage space availableNoProprietary with public APIAccount required, app versions for web, Windows, Linux, macOS. Data synced automatically between clients and server. Usable offline.
PaperpileStefan Washietl, Gregorgy Jordan, Andreas Gruber2013Continually updated onlineUS$2.99/month for academics, 9.99/month otherwiseNoProprietaryWeb-app, integrates with Google Docs, collaboration & sharing features, currently only on Google Chrome
PapersReadCube2011-102023-04-04v.4.35.2224US$ 3/month for students, 5/month academicsNoProprietaryWeb-app, Desktop (MacOS, Windows), Mobile (iOS and Android). Microsoft Word and Google Docs add-in. Browser extension (Chrome, Firefox, Edge, Safari)
refbaserefbase developers2003-06-032014-02-280.9.6FreeYesGNU GPLWeb-based for institutional repositories/self-archiving
RefDBrefdb developers2001-04-252022-02-131.0.3FreeYesGNU GPLNetwork-transparent; XML/SGML bibliographies
RefWorksEx Libris / ProQuest / Clarivate20012024-07-094.6Institutional subscriptionNoProprietaryWeb-based, browser-accessed, Word & Google Docs
ZoteroCorporation for Digital Scholarship20062026-02-038.0.2Free / Online storage free up to 300 MB / Additional storage space availableYesAGPLNative desktop and mobile applications and web browser connectors. Browser access through Zotero.org or cloud-based database folder on a user's computer (Google Drive, Dropbox, etc.).

Operating system support

In the case of web applications, this describes the server OS. For centrally hosted websites that are proprietary, this is not applicable. Any client OS can connect to a web service unless stated otherwise in a footnote.

SoftwareWindowsmacOSLinuxChromeOSBSDUnixiOS AppAndroid AppWindows App
BebopYesYesYes?YesYesNoNoNo
BibBase—N/a—N/a—N/a—N/a—N/a—N/a???
BibDeskNoYesNoNoNoNoNoNoNo
BibSonomy—N/a—N/a—N/a—N/a—N/a—N/a???
BookendsNoYesNo?NoNoYes??
CitaviYesNoNoNoNoNoNoNoNo
EndNoteYesYesNoNoNoNoYesNoNo
JabRefYesYesYesNoNoYesNoNoNo
KBibTeXExperimentalExperimentalYes?YesYesNoNoNo
MendeleyYesYesYesNoNoNoNo (phased out as of March 15, 2021)No (phased out as of March 15, 2021)No
PaperpileYesYesYesYesNo (requires Chromium)No (requires Chromium)YesYesNo
PapersYesYesNoYesNoNoYesYesYes
PybliographerPartialPartialYes?YesYesNoNoNo
refbaseYesYesYesYesYesYesNoNoNo
RefDBYesYesYes?YesYesNoNoNo
RefWorksYesYesNoYesYes?No?No
ZoteroYesYesYesIntel onlyNoYesYesYesYes

Export file formats

This table lists the machine-readable file formats that can be exported from reference managers. These are typically used to share data with other reference managers or with other people who use a reference manager. To exchange data from one program to another, the first program must be able to export to a format that the second program may import. Import file formats are in a table below this one.

SoftwareBibTeXEndnote/Refer/BibIXMedlineMODS XMLRISOther
BebopYesNoNoNoNounAPI
BibBaseYesNoNoNoNoNone
BibDeskYesNoYesYesYesEndnote XML, user customizable
BibSonomyYesYesNoNoYesVarious
BookendsYesYesYesNoYesVarious user-customizable
CitaviYesYesYesYesYesNVivo and various others
EndNoteYesYesYesNoYesVarious
JabRefYesYesNoYesYesBibTeXML, DocBook, HTML, OpenDocument for OO.o, RTF, SQL database, user-customizable
KBibTeXYesYesNoDependsYesPDF, PostScript, HTML, XML, RTF
MendeleyYesYesNoNoYesEndnote XML
PaperpileYesNoNoNoYesCSV,JSON
PapersYesYesNoNoYesNone
PybliographerYesYesYesNoNoOvid
refbaseYesYesNoYesYesCOinS, OpenDocument for OO.o, SRW XML via SRU, unAPI, Word XML
RefDBYesYesNoYesYesSRW XML via SRU web service, DocBook, TEI
RefWorksYesYesNoYesYesRIS, BibTeX, Tab delimited or XML metadata
ZoteroYesYesAs of version 4.0YesYesCOinS, CSV, Several RDF format standards, TEI, Wikipedia citation templates, Endnote XML, CSL JSON, Refer/BiblX, RefWorks tagged

Import file formats

This table lists the file formats which may be manually imported into the reference managers without needing to connect to one particular database. Many of these database companies use the same name for their file format as they do for their database (including Copac, CSA, ISI, Medline, Ovid, PubMed, and SciFinder). For the ability to retrieve citations from the particular databases (rather than the file format), please refer to the database connectivity table that is below this table.

As of January 2021[update], CSL YAML is not supported by any reference management system.

SoftwareBibTeXCopacCSAEndnote/Refer/BibIXISIMedlineMODS XMLOvidPubMedRISSciFinderOther
BebopYesNoNoNoNoNoNoNoNoNoNoNone
BibBaseYesNoNoNoNoNoNoNoNoNoNoNone
BibDeskYesYesNoYesYesYesYesNoYesYesYesMARC, JSTOR, Reference Miner
BibSonomyYesNoNoYesNoNoNoNoNoNoNoFirefox bookmarks
BookendsYesYesYesYesYesYesNoYesYesYesYesVarious user-customizable
CitaviYesYesYesYesYesYesYesYesYesYesYesVarious
EndNoteNoNoYesYesYesYesNoYesYesYesYesVarious
JabRefYesYesYesYesYesYesYesYesYesYesYesBibTexML, Biomail, Inspec, JSTOR, MSBib, PDF widh XMP annotations, REPEC (NEP), SilverPlatter, SixPack
KBibTeXYesNoNoYesNoNoDependsNoYesYesNoNone
MendeleyYesNoNoYesNoNoNoNoNoYesNoBrowser bookmarks
PaperpileYesNoNoYesYesYesNoNoYesYesNoPDF, MARC
PapersYesNoNoYesNoNoNoNoYesYesNoPDF
PybliographerYesNoNoYesYesYesNoYesNoNoNoNone
refbaseYesYesYesYesYesYesYesNoYesYesYesRefWorks
RefDBYesYesNoYesYesYesYesNoYesYesYesMARC, risx
RefWorksYesYesYesYesYesYesYesYesYesYesYesVarious
ZoteroYesNoNoYesYesYesYesYesYesYesNoCOinS, MARC, RDF, unAPI, Browser bookmarks, Endnote XML, others

Citation styles

SoftwareAPAChicago/TurabianHarvardMLAOtherExtension method
BebopNoNoNoNoNoNo
BibBaseYesNoNoNoNoNo
BibDeskYesYesYesYesVariousBibTeX style files (use Pandoc § CiteProc for CSL) or BibDesk export templates
BibSonomyYesNoYesNoNoNo
BookendsYesYesYesYesVarious[citation needed]?
CitaviYesYesYesYesVariousCitavi format (through GUI), includes conditions and programmable components; BibTeX or BibLaTeX when used with LaTeX (use Pandoc § CiteProc for CSL)
EndNoteYesYesYesYesVariousEndNote format (through GUI)
JabRefYesYesYesYesVariousBibTeX style files or BibLaTeX (use Pandoc § CiteProc for CSL)
KBibTeXYesYesYesYesVariousBibTeX style files (use Pandoc § CiteProc for CSL)
MendeleyYesYesYesYesVariousCSL
PaperpileYesYesYesYesVariousCSL
PapersYesYesYesYesVariousCSL; BibTeX or BibLaTeX when used with LaTeX
PybliographerYesNoNoNoNonePybliographer XML
refbaseYesYesYesYesVarious polar & marine journalsPHP
RefDBYesYesYesYes21 biomedical & law journalsXML (citestylex.dtd), interactive script
RefWorksYesYesYesYesVariousRefWorks format (through GUI); CSL
ZoteroYesYesYesYesVariousCSL; BibTeX or BibLaTeX when used with LaTeX

Reference list file formats

EndNote is incompatible with LaTeX. Among other things, it does not provide for robust citation keys.

SoftwareHTMLLaTeXRTFPlain textRSSOther
BebopYesNoNoNoYesunAPI
BibBaseYesNoNoNoYesNo
BibDeskYesYesYesYesYesAtom, DOC, PDF, XML,
BibSonomyYesNoYesYesYesOpenOffice-CSV
BookendsYesNoYesYesNoClipboard
CitaviYesYesYesYesNoClipboard, DOC, ODT, PDF, HTML
EndNoteYesNoYesYesNoClipboard, XML
JabRefYesYesYesYesNoClipboard
KBibTeXYesNoYesNoNoPDF, PS
MendeleyYesYesYesYesYesClipboard, embeddable HTML widget, RSS
PaperpileYesYesYesYesNoClipboard
PapersYesNoNoNoNoPDF
PybliographerYes?NoYesNoNo
refbaseYesYesYesYesYesMarkdown, PDF, unAPI
RefDBYes?YesYesNoDocBook, TEI
RefWorksYesNoYesYesNoDOC, ODT
ZoteroYesPossible via pluginYesPossible via pluginsYesClipboard

Word processor integration

Some reference management software include support for automatic embedding and (re)formatting of references in Word processor programs. This table lists this type of support for Microsoft Word, Pages, Apache OpenOffice / LibreOffice Writer, the LaTeX editors Kile and LyX, and Google Docs. Other programs are able to scan RTF or other textual formats for inserted placeholders which are subsequently formatted. Most reference management programs support copy/paste or drag-and-drop of references into any editor, but this is not meant here.

SoftwareWord for WindowsWord for MacWord OnlinePagesApache OpenOffice / LibreOfficeKile/LyXGoogle DocsRTF scanOther
BebopNoNoNoNoNoNoNoNoNone
BibBaseNoNoNoNoNoNoNoNoNone
BibDeskNoNoNoNoNoYesNoYes
BibSonomyNoNoNoNoNoNoNoNoNone
BookendsYesYesNoYesYesNoNoYesMellel, Nisus
CitaviYesYesNoNoOnly versions prior to 6.0YesNoOnly versions prior to 6.0LaTeX editors Texmaker, TeXnicCenter, TeXstudio, TeXworks, WinEdt, WinShell
EndNoteYesYesYesYesNoNoYesYesNo
JabRefYes???YesYesNo?Emacs, Texmaker, TeXstudio, Vim, WinEdt
KBibTeXNo???NoYesNo?None
MendeleyYesPartialYesNoYesNoNo?NeoOffice
PaperpileYesYesNoNoNoNoYesNoNo
PapersYesYesYesYesYesNoYesNo, Scrivener, Ulysses
PybliographerNo???YesYesNo?None
refbaseNo???YesNoNoYes, MediaWiki, SPIP
RefDBNo???NoNoNoNoNone
RefWorksYesYesNoNoNoNoYesYesNone
ZoteroYesYesNoNoYes(with LyZ)YesYesVarious

Database connectivity

This table lists the academic databases and search engines which reference managers can import from. In some cases, a search and retrieval can be conducted directly in the reference manager. In others, a bookmarklet or Firefox extension will allow a site to be scraped.

SoftwareArXivCiteSeerIEEE XplorePubMedUnpaywallOther
BebopNoNoNoNoNoNo
BibBaseNoNoNoNoNoDBLP, Zotero, BibSonomy, Mendeley
BibDeskYesYesNoYesNoACM portal, Jstor, DBLP, Google Scholar, Web of Science, any Z39.50 or Entrez, and others
BibSonomyYesYesYesYesNoVarious
BookendsYesNoNoYesNoWeb of Science, Amazon, Google Scholar, Z39.50
CitaviYesYesYesYesNoWorldCat/OCLC, Ovid, EBSCO, ProQuest, Web of Science, Z39.50 (4500+ online resources), SRU. Further catalogs are added upon . Browser plugins (Firefox, Chrome, Internet Explorer) support DOI lookup, ISBN lookup, PubMed ID lookup, PMCID lookup, arXiv ID lookup, COinS and import from Wikipedia.
EndNoteYesNoYesYesNoVarious, any Z39.50
JabRefYesYesYesYesYesACM Portal, CrossRef, DBLP, DOAJ, DOI, GVK, Google Scholar, INSPIRE-HEP, Medline, MathSciNet, SAO/NASA Astrophysics Data System, Springer, and zbMATH
KBibTeXYesYesYesYesNoBibSonomy, CiteBase, CSB, DBLP, Google Scholar, ScienceDirect, INSPIRE-HEP, Z MATH, Z39.50
MendeleyYesYesYesYesNoVarious
PaperpileYesNoYesYesYesGoogle Scholar, INSPIRE-HEP, ACM portal, Jstor, Web of Science
PapersYesNoYesYesNoMicrosoft Academic, Google Scholar
PybliographerNoNoNoYesNoNone
refbaseYesNoNoYesNoDOI lookup
RefDBYesNoNoYesNoAny Z39.50
RefWorksNoNoNoYesNoVarious
ZoteroYesYesYesYesYesVarious

Password "protection" and network versions

Some reference managers provide network functionality (N/A, not available, means the product has no networking, while "No" indicates it does but lacks an implemented feature). The Lightweight Directory Access Protocol (LDAP) is an open, vendor-neutral, industry standard application protocol for accessing and maintaining distributed directory services over an Internet Protocol (IP) network.

SoftwarePasswordedLDAPNetworking
User-specific permissionsSimultaneous write access
BebopNo?—N/a—N/a
BibBase—N/a?—N/a—N/a
BibDeskYes?NoNo
BibSonomyYes?YesYes
Bookends????
CitaviYes?YesYes
EndNoteYes?NoNo
JabRefNo?NoPartial
KBibTeXNo?—N/a—N/a
MendeleyYes?YesYes
PaperpileYes?YesYes
PapersYes?YesYes
Pybliographer????
refbaseYes?YesYes
RefDBYes?YesYes
RefWorksYes??Yes
ZoteroYes?YesYes

Discontinued software

SoftwareDeveloperFirst public releaseLatest stable release dateLatest stable versionCost (USD)Free softwareLicenseNotes
BebopALaRI Institute2007-11-082009-11-101.1FreeYesBSDWeb-based BibTeX front-end (Apache, PHP, MySQL)
BiblioscapeCG Information19972015-06-2210.0.3.6US$79-299NoProprietaryODBC; web access in Pro ed; optional client/server; discontinued?
CiteULikeOversity Limited2004-11Shut down on 2019-03-30FreeNoProprietaryCentrally hosted website
colwizcolwiz Ltd20112016-05-09Free / Online storage free up to 3 GB / Additional storage space availableNoProprietaryNow combined with wizdom.ai
Pybliographerpybliographer developers1998-10-30 (0.2)2018-04-031.4.0FreeYesGNU GPLPython/GTK2
QiqqaQiqqa2010-042020-10-04v80FreeYesGNU GPLFrom end 2020, Open Source
Reference ManagerThomson Reuters1984201012.0.3Not for sale anymore, sales ceased December 31, 2015NoProprietaryNetwork version; built-in web publishing tool; discontinued
ReferencerReferencer developers2008-03-15Discontinued1.2.2FreeYesGNU GPLBibTeX front-end
RefMERefME2014Shut down in 2017FreeNoProprietaryWeb, iOS and Android; Chrome and Safari Extensions available; discontinued
SciRefScientific Programs20122020-07-301.6.2US$38.90 / Free trial versionNoProprietary
WizFolioWizPatent2008-06Shut down in 2017AvataraUS$25 / Free Basic versionNoProprietaryCentrally hosted website; discontinued

Notes

Further reading

  • Gilmour, Ron; Cobus-Kuo, Laura (2011). . Issues in Science and Technology Librarianship. Summer 2011 (66). doi:.
  • Perkel, Jeffrey M. (2015-11-02). . Nature. 527 (7576): 123–124. Bibcode:. doi:. ISSN . PMID .
  • Technische Universität München Library (2020-06-30). (PDF).
  • Tramullas, Jesús; Sánchez-Casabón, Ana I.; Garrido-Picazo, Piedad (2015). . El Profesional de la Información. 25 (4): 680–688. arXiv:. Bibcode:. doi:. ISSN . S2CID .